WormBase Tree Display for Gene: WBGene00238419

WBGene00238419 SMap: S_parent: Sequence: OVOC_OM1b_63
  Identity: Version: 3
    Name: CGC_name: Ovo-smp-1 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC1610
      Molecular_name: OVOC1610
        OVOC1610.1
        OVP13453
      Public_name: Ovo-smp-1
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-smp-1
        3 24 Mar 2014 12:07:45 WBPerson2062 Event: Acquires_merge: WBGene00238418
      Acquires_merge: WBGene00238418
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smp
    RNASeq_FPKM: WBls:0000101 1.9073 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        3.34143 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 (15)
      WBls:0000107 3.72888 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 11.3666 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        16.6997 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        1.70277 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        9.92302 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
      WBls:0000664 2.36792 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        2.88274 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        3.39755 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00246861
    Ortholog: WBGene00190473 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155282 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00038880 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00231007 Brugia malayi From_analysis: WormBase-Compara
      WBGene00004889 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00120646 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g12360 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6975 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5865 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8256 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13375 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12274 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9270 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13417 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26334 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9210 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9433 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00009.g734 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-smp-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold572.g4304 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_05592.g35262 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21220 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001443 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05993 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5977 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10001500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00060899 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00098145 Pristionchus pacificus From_analysis: WormBase-Compara
      chrI_pilon.g2971 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00261789 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285301 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00236936 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237947 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable semaphorin receptor binding activity. Is an ortholog of C. elegans smp-1. In C. elegans, smp-1 is involved in nematode male tail mating organ morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: OVOC1610
    Corresponding_CDS_history: OVOC1610:ov242
    Corresponding_transcript: OVOC1610.1
    Other_sequence (88)
  Method: Gene