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WormBase Tree Display for Gene: WBGene00124748

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Name Class

WBGene00124748SMapS_parentSequenceCjap.Contig16299
IdentityVersion8
NameCGC_nameCjp-acr-6From_analysisInferred_from_orthology
Sequence_nameCJA05544
Molecular_nameCJA05544
CJA05544.1
JA42277
Public_nameCjp-acr-6
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-acr-6
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCjp-acr-6
501 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
627 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameCjp-acr-6
728 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
828 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-acr-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
RNASeq_FPKMWBls:00000040.404237From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.39107From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.12417From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
0.24834From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.028447From_analysisRNASeq.japonica.WBls:0000041.control_median
0.056893From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.085991From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.130907From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.185785From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.31434From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001010.056893From_analysisRNASeq.japonica.total_over_all_stages.control_median
0.133198From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00185785
00185786
00185787
00185788
00185789
00185790
OrthologWBGene00000042Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000043Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000045Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00002974Caenorhabditis elegansFrom_analysisTreeFam
WBGene00006765Caenorhabditis elegansFrom_analysisTreeFam
WBGene00051449Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00051450Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00059982Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00062403Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00062740Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00079796Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00156787Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00156911Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00144426Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00145120Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00141395Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193924Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00192500Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00042167Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g9617Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7699Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10469Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g21596Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20549Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21421Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g843Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8600Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5611Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11328Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21035Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-acr-6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold456.g1364Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_04900.g34001Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18830Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002285Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05946Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12059Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10347801Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00117414Pristionchus pacificusFrom_analysisWormBase-Compara
chrI_pilon.g687Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (118)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acr-6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCJA05544
Corresponding_transcriptCJA05544.1
Other_sequenceJI181076.1
JI172126.1
JI174704.1
RS09691
JI169630.1
AS16165
RSC04005_1
Experimental_infoExpr_patternExpr1085970
Microarray_resultsGPL14145_CJA05544_300-359_0.939_2_B
GPL14145_CJA05544_431-490_0.935_3_C
GPL14145_CJA05544_495-554_0.945_1_A
Remark[190208 pad] The CGC name Cjp-acr-6 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[191001 pad] The CGC name Cjp-acr-6 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cjp-acr-6 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene