WormBase Tree Display for Gene: WBGene00114841

WBGene00114841 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 5
    Name: Sequence_name: PPA25287
      Molecular_name: PPA25287
        PPA25287.1
        PP56580
      Other_name: GENEPREDICTION_SNAP300000082135
        UMM-S387-4.1 Person_evidence: WBPerson606
      Public_name: PPA25287
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-mix-1
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-mix-1
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 9.60822 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 10.389 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        21.5587 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        9.60822 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00179408
      00179409
      00179410
      00179411
    Ortholog: WBGene00152805 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00025953 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00234047 Brugia malayi From_analysis: WormBase-Compara
      WBGene00003367 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00119889 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00125834 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00207466 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00247320 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g6943 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g6945 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15314 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g16302 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g6887 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1693 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g1695 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1163 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g1165 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9132 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g9134 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16571 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g16573 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2443 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g2445 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6930 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g6932 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3508 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g3510 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11557 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00049.g2574 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00880.g14716 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_II.g5766 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_II.g5769 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold618.g6065 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold618.g6069 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00036.g1965 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00036.g1967 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17675 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005450 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_005452 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14683 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19769 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20340910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00053469 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00053471 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrII_pilon.g5817 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrII_pilon.g5819 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00260182 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00301172 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301223 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00089965 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098666 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107491 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109381 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112336 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203907 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in chromosome organization. Predicted to be located in chromosome. Is an ortholog of C. elegans mix-1. In C. elegans, mix-1 is involved in several processes, including dosage compensation by hypoactivation of X chromosome; mitotic chromosome condensation; and positive regulation of nematode male tail tip morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: PPA25287
    Corresponding_transcript: PPA25287.1
    Other_sequence (54)
  Experimental_info: Microarray_results: GPL14372_Probes_83896
      GPL14372_Probes_83897
      GPL14372_Probes_83899
      GPL14372_Probes_83900
      GPL14372_Probes_83901
      GPL14372_Probes_83902
      GPL14372_Probes_83903
      GPL14372_Probes_83904
      GPL14372_Probes_83905
      GPL14372_Probes_83906
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Remark: [190208 pad] The CGC name Ppa-mix-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-mix-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene