WormBase Tree Display for Gene: WBGene00109263

WBGene00109263 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 10
    Name: CGC_name: Ppa-unc-58.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA19709
      Molecular_name: PPA19709
        PPA19709.1
        PP71580
      Other_name: GENEPREDICTION_SNAP300000076544
        UMM-S285-5.12 Person_evidence: WBPerson606
      Public_name: Ppa-unc-58.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00205545
        3 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00205641
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-unc-58.1
        5 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        6 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Ppa-unc-58.1
        7 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Removed
        8 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Ppa-unc-58.1
        9 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        10 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-unc-58.1
      Acquires_merge: WBGene00205545
        WBGene00205641
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000032 1.81709 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.81709 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        2.75168 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        6.43794 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00176826
      00176827
      00176828
    Ortholog: WBGene00142577 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00025136 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00225885 Brugia malayi From_analysis: WormBase-Compara
      WBGene00006792 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00125641 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00241052 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g11756 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14042 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9818 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17685 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20570 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25070 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12710 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1841 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5687 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15907 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00262.g8071 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-58 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13666 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00147.g5613 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01385 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023521 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12851 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5859 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0065710 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00063130 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrX_pilon.g19850 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266442 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288331 Trichuris muris From_analysis: WormBase-Compara
    Paralog (48)
    Structured_description: Automated_description: Predicted to enable potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-58. In C. elegans, unc-58 is involved in several processes, including muscle contraction; parturition; and regulation of muscle contraction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: PPA19709
    Corresponding_transcript: PPA19709.1
    Other_sequence (22)
  Experimental_info: Microarray_results: GPL14372_Probes_4217
      GPL14372_Probes_4218
      GPL14372_Probes_43552
      GPL14372_Probes_43554
  Remark: [190208 pad] The CGC name Ppa-unc-58.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [191001 pad] The CGC name Ppa-unc-58.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-unc-58.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene