WormBase Tree Display for Gene: WBGene00064045

WBGene00064045 SMap: S_parent: Sequence: Crem_Contig61
  Identity: Version: 7
    Name: CGC_name: Cre-thn-5 From_analysis: Inferred_from_orthology
      Sequence_name: CRE13476
      Molecular_name: CRE13476
        CRE13476.1
        RP38076
      Other_name: cr01.sctg44.wum.105
        Cre-thn-5.1 From_analysis: Inferred_from_orthology
      Public_name: Cre-thn-5
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-thn-5
        3 03 Jul 2008 11:45:55 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE13476
                Other_name: cr01.sctg44.wum.105
        4 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cre-thn-5.1
                Other_name: Cre-thn-5
        5 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cre-thn-5
                Other_name: Cre-thn-5.1
        6 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Cre-thn-5.1
                Other_name: Cre-thn-5
        7 04 Jun 2020 14:38:21 WBPerson1983 Name_change: CGC_name: Cre-thn-5
                Other_name: Cre-thn-5.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: thn
    RNASeq_FPKM: WBls:0000004 0.115996 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.231992 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (50)
      WBls:0000027 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_mean
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.025611 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.076832 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 10.1809 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        11.4801 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.44842 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.38678 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        26.6386 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.42703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        6.80397 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        9.26031 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 0.054192 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.25009 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.291834 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2.16971 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog: WBGene00021999 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039172 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00111800 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00120808 Caenorhabditis japonica From_analysis: OMA
      WBGene00140287 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00150936 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00182047 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00117760 Pristionchus pacificus From_analysis: WormBase-Compara
      CSP26.g16342 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12396 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4569 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21226 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g21231 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g23889 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3699 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP40.g10671 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g10672 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g13272 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g17673 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g17675 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g17677 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_02692.g27570 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_013498 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g12217 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g12461 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g3563 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g3564 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g10384 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (12)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Thaumatin family and Osmotin/thaumatin-like superfamily. Is an ortholog of C. elegans thn-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CRE13476
    Corresponding_transcript: CRE13476.1
    Other_sequence: FD516010.1
      CSC01708_1
  Experimental_info: Expr_pattern: Expr1093875
    Microarray_results: GPL14146_CRE13476_339-398_0.920_6_B
      GPL14146_CRE13476_560-619_0.958_1_A
      GPL14146_CRE13476_633-692_0.942_2_C
  Method: Gene