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WormBase Tree Display for Gene: WBGene00063977

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Name Class

WBGene00063977SMapS_parentSequenceCrem_Contig61
IdentityVersion3
NameCGC_nameCre-srd-12From_analysisInferred_from_orthology
Sequence_nameCRE13436
Molecular_nameCRE13436
CRE13436.1
RP03293
Other_namecr01.sctg44.wum.39
Public_nameCre-srd-12
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:55WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13436
Other_namecr01.sctg44.wum.39
304 Jul 2008 11:06:44WBPerson4055Name_changeCGC_nameCre-srd-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrd
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (48)
WBls:00000270From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.04345From_analysisRNASeq.remanei.WBls:0000027.control_median
2.08227From_analysisRNASeq.remanei.WBls:0000027.control_mean
4.08691From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.24216From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000380.27271From_analysisRNASeq.remanei.WBls:0000038.control_mean
0.336345From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
0.481785From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000410.051606From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.054405From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.126796From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.434898From_analysisRNASeq.remanei.WBls:0000041.control_median
0.53032From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.743From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.0075From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.19861From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000630.048063From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.48063From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
RNASeq.remanei.WBls:0000063.control_median
WBls:00001010.492683From_analysisRNASeq.remanei.total_over_all_stages.control_mean
0From_analysisRNASeq.remanei.total_over_all_stages.control_median
OrthologWBGene00005090Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00005091Caenorhabditis elegansFrom_analysisOMA
WormBase-Compara
WBGene00039040Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00118934Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00182682Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00157502Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00136806Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00119332Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122317Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00190543Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00128540Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00121770Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00123466Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00124217Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00039039Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00207134Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00280825Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g11231Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g11328Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g11329Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g11330Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g11331Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5973Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g337Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6396Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g6397Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6529Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21541Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7374Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16765Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16766Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4124Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4125Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4126Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4127Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4128Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4129Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g751Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g752Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g864Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g866Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g867Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8949Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21775Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29218Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20331Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01447.g16427Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g13376Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13378Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18586Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00414.g11041Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19724Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013573Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_20208111Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40006810Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40227500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0029010Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10477Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g10479Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (55)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Serpentine type 7TM GPCR chemoreceptor Srd and 7TM GPCR, serpentine receptor class d (Srd). Is an ortholog of C. elegans srd-12.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCRE13436
Corresponding_transcriptCRE13436.1
Experimental_infoExpr_patternExpr1109024
Microarray_resultsGPL14146_CRE13436_740-799_0.961_4_A
MethodGene