WormBase Tree Display for Gene: WBGene00026745

WBGene00026745 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 1
    Name: CGC_name: Cbr-ddx-10 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03992
      Molecular_name: CBG03992
        CBG03992.1
        CBP06620
      Other_name: CBG_03992 Accession_evidence: NDB HE600906
      Public_name: CBG03992
    DB_info: Database: NDB locus_tag CBG_03992
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-ddx-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ddx
    RNASeq_FPKM: WBls:0000002 20.759 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        23.0089 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        23.4821 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        24.7855 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        16.4861 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        21.3782 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        22.1206 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 20.9535 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        22.546 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        24.1385 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        17.8344 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        20.9755 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 17.2755 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        17.6059 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        17.9362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        16.5973 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        17.8113 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        18.2913 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        21.8362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.966239 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        18.9514 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.02403 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        7.64722 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        10.9877 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        11.8464 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        24.4441 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 18.101 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 22.4625 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        22.8123 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        23.4018 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        23.9912 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        38.4815 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.56511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 13.8308 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        28.5954 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        29.8199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        32.2318 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        34.6438 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        36.0869 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        16.9659 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        25.0835 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        26.0718 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        27.4517 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 23.1043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        24.0771 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        24.7803 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        26.4974 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        30.5052 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        54.0667 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        25.6388 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        30.9389 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        33.1079 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 21.4241 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        22.8123 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        21.3543 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        21.3948 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00125082
      00125083
    Ortholog: WBGene00021277 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072772 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144463 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00098085 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00191400 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00211815 Caenorhabditis japonica From_analysis: Inparanoid_8
      CBOVI.g9144 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g17387 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3732 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11117 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7478 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7503 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21275 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6206 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_00482.g11358 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y23H5B.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00542.g12627 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10421 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003111 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11778 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19526 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10283500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00226600 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g345 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00121175 Caenorhabditis japonica From_analysis: WormBase-Compara
      CSP21.g4209 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP40.g17043 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17134 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      CSP39.g23116 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g24758 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      WBGene00248666 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260832 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294493 Trichuris muris From_analysis: WormBase-Compara
    Paralog (31)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans ddx-10. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBG03992
    Corresponding_CDS_history: CBG03992:bp194
    Corresponding_transcript: CBG03992.1
    Other_sequence (18)
  Experimental_info: Expr_pattern: Expr1064080
    Microarray_results: GPL8303_CB6_WBGene00026745_A
      GPL8303_CB6_WBGene00026745_B
      GPL14143_CBG03992_1053-1112_0.868_42_C
      GPL14143_CBG03992_1370-1429_0.864_46_A
      GPL14143_CBG03992_1480-1539_0.890_16_B
  Method: Gene