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WormBase Tree Display for Gene: WBGene00011267

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Name Class

WBGene00011267SMapS_parentSequenceR17
IdentityVersion2
NameCGC_namefbxb-85Person_evidenceWBPerson655
Sequence_nameR17.1
Molecular_nameR17.1
R17.1.1
CE16314
Other_nameCELE_R17.1Accession_evidenceNDBBX284603
Public_namefbxb-85
DB_infoDatabaseAceViewgene3L936
WormQTLgeneWBGene00011267
WormFluxgeneWBGene00011267
NDBlocus_tagCELE_R17.1
PanthergeneCAEEL|WormBase=WBGene00011267|UniProtKB=O18004
familyPTHR22899
NCBIgene187876
RefSeqproteinNM_066988.3
TrEMBLUniProtAccO18004
UniProt_GCRPUniProtAccO18004
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
212 Dec 2005 17:22:20WBPerson2970Name_changeCGC_namefbxb-85
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxb
Allele (24)
RNASeq_FPKM (74)
OrthologWBGene00026392Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026419Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026420Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026421Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026426Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026427Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031634Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00032971Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039240Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039241Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039242Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039250Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00039252Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00041416Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WBGene00041424Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WBGene00041425Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00068780Caenorhabditis remaneiFrom_analysisOMA
WBGene00068779Caenorhabditis remaneiFrom_analysisOMA
WBGene00068142Caenorhabditis remaneiFrom_analysisOMA
WBGene00068138Caenorhabditis remaneiFrom_analysisOMA
WBGene00083021Caenorhabditis remaneiFrom_analysisOMA
WBGene00066439Caenorhabditis remaneiFrom_analysisOMA
WBGene00080717Caenorhabditis remaneiFrom_analysisOMA
WBGene00066442Caenorhabditis remaneiFrom_analysisOMA
WBGene00080721Caenorhabditis remaneiFrom_analysisOMA
WBGene00070671Caenorhabditis remaneiFrom_analysisOMA
WBGene00070669Caenorhabditis remaneiFrom_analysisOMA
WBGene00064104Caenorhabditis remaneiFrom_analysisOMA
WBGene00154117Caenorhabditis brenneriFrom_analysisOMA
WBGene00154973Caenorhabditis brenneriFrom_analysisOMA
WBGene00157221Caenorhabditis brenneriFrom_analysisOMA
WBGene00156184Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00141446Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00163200Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00154792Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00156806Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00164068Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00162948Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00160176Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00214663Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00137138Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00219112Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00086026Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00072233Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00086025Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00072234Caenorhabditis remaneiFrom_analysisInparanoid_8
chrIII_pilon.g8949Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (144)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnriched in several structures, including ABplaapaaa; ABplapaaaap; ABplapaaapa; NSM; and interneuron based on tiling array and single-cell RNA-seq studies. Is affected by several genes including swsn-1; mut-2; and ztf-11 based on tiling array; RNA-seq; and microarray studies. Is affected by twelve chemicals including Mercuric Chloride; rotenone; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated; F-box associated domain, type 2; and F-box domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSR17.1
Corresponding_transcriptR17.1.1
Associated_featureWBsf651488
WBsf655482
WBsf227529
WBsf227530
WBsf227531
WBsf227532
Experimental_infoRNAi_resultWBRNAi00034951Inferred_automaticallyRNAi_primary
WBRNAi00006324Inferred_automaticallyRNAi_primary
WBRNAi00052002Inferred_automaticallyRNAi_primary
WBRNAi00017886Inferred_automaticallyRNAi_primary
Expr_patternExpr1025146
Expr1034946
Expr1155644
Expr2011686
Expr2029925
Microarray_results (17)
Expression_cluster (113)
Interaction (41)
Map_infoMapIIIPosition5.42989Error0.006803
PositivePositive_cloneR17Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00012854
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene