WormBase Tree Display for Gene: WBGene00010051

WBGene00010051 SMap: S_parent: Sequence: F54D5
  Identity: Version: 1
    Name: Sequence_name: F54D5.5
      Molecular_name: F54D5.5a
        F54D5.5a.1
        CE36386
        F54D5.5b
        CE37920
        F54D5.5a.2
        F54D5.5b.1
      Other_name: CELE_F54D5.5 Accession_evidence: NDB BX284602
      Public_name: F54D5.5
    DB_info: Database: AceView gene 2L856
        WormQTL gene WBGene00010051
        WormFlux gene WBGene00010051
        NDB locus_tag CELE_F54D5.5
        Panther gene CAEEL|WormBase=WBGene00010051|UniProtKB=Q5FC73
          family PTHR37960
        NCBI gene 174771
        RefSeq protein NM_001393197.1
            NM_001027032.5
        TREEFAM TREEFAM_ID TF316201
        TrEMBL UniProtAcc Q20771
            Q5FC73
        UniProt_GCRP UniProtAcc Q5FC73
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (42)
    RNASeq_FPKM (74)
    Ortholog: WBGene00025829 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053597 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140039 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127145 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g7379 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14895 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3708 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1387 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12394 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27204 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13070 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14317 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g17826 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00597.g12621 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F54D5.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold473.g1678 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00838.g15934 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14153 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005314 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20326400 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Paralog: WBGene00008578 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015899 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00045357 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Enriched in several structures, including ABalappaap; ABalpapaap; ciliated neurons; germ line; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including cyc-1; swsn-1; and puf-8 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including Tunicamycin; Cry5B; and glycine based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: F54D5.5a
      F54D5.5b
    Corresponding_CDS_history: F54D5.5:wp57
      F54D5.5:wp119
    Corresponding_transcript: F54D5.5a.1
      F54D5.5a.2
      F54D5.5b.1
    Other_sequence: CJC10639_1
      CRC06771_1
      CBC04183_1
      CR03095
    Associated_feature (11)
  Experimental_info: RNAi_result (24)
    Expr_pattern: Expr1019054
      Expr1034382
      Expr1152117
      Expr2004155
      Expr2022379
    Drives_construct: WBCnstr00031706
    Construct_product: WBCnstr00031706
    Microarray_results (24)
    Expression_cluster (196)
    Interaction (121)
  Map_info: Positive: Positive_clone: F54D5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 3.76281
  Reference: WBPaper00035598
  Method: Gene