WormBase Tree Display for Gene: WBGene00001639
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WBGene00001639 | SMap | S_parent | Sequence | M01F1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | gly-14 | Person_evidence | WBPerson228 | |||||
Sequence_name | M01F1.1 | ||||||||
Molecular_name | M01F1.1 | ||||||||
M01F1.1.1 | |||||||||
CE01029 | |||||||||
Other_name | CELE_M01F1.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | gly-14 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gly | ||||||||
Allele (46) | |||||||||
Strain | WBStrain00031628 | ||||||||
WBStrain00000249 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00001637 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001638 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016402 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Concise_description | gly-14 encodes a UDP-N-acetyl-D-glucosamine:alpha-3-D-mannoside beta-1, 2-N-acetylglucosaminyltransferase I (GnT 1); GLY-14 exhibits GnT 1 activity when assayed in vitro; a gly-14::lacZ reporter construct is expressed only in the intestine throughout larval and adult stages, with expression generally restricted to the anterior and posterior gut cells; a gly-14 deletion allele is phenotypically normal, even when in combination with a gly-12 mutation. | Paper_evidence | WBPaper00003352 | |||||
WBPaper00005889 | |||||||||
WBPaper00005927 | |||||||||
WBPaper00005572 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 10 Apr 2012 00:00:00 | ||||||||
Automated_description | Enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity. Involved in protein N-linked glycosylation. Located in perinuclear region of cytoplasm. Is an ortholog of human MGAT1 (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | M01F1.1 | |||||||
Corresponding_transcript | M01F1.1.1 | ||||||||
Other_sequence | AF082012 | ||||||||
XIC02636_1 | |||||||||
JI170365.1 | |||||||||
CR06043 | |||||||||
XI03197 | |||||||||
CRC08308_1 | |||||||||
SS01947 | |||||||||
SSC00499_1 | |||||||||
CBC16606_1 | |||||||||
Associated_feature | WBsf991788 | ||||||||
WBsf991789 | |||||||||
WBsf991790 | |||||||||
WBsf1014575 | |||||||||
WBsf226351 | |||||||||
Experimental_info | RNAi_result | WBRNAi00017102 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007027 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050765 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027852 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050766 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094958 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00065496 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr654 | ||||||||
Expr655 | |||||||||
Expr656 | |||||||||
Expr1021357 | |||||||||
Expr1154462 | |||||||||
Expr2012136 | |||||||||
Expr2030372 | |||||||||
Drives_construct | WBCnstr00012477 | ||||||||
Microarray_results | SMD_M01F1.1 | ||||||||
194036_s_at | |||||||||
AFFX-Ce_gly14_3_at | |||||||||
AFFX-Ce_gly14_5_at | |||||||||
AFFX-Ce_gly14_M_at | |||||||||
A_12_P101628 | |||||||||
Aff_M01F1.1 | |||||||||
GPL13394_WBGene00001639 | |||||||||
GPL13914_M01F1.1 | |||||||||
GPL14144_M01F1.1_1092-1151_0.939_1_A | |||||||||
GPL19516_CGZ0029652 | |||||||||
GPL21109_M01F1.1 | |||||||||
GPL3518_CE01029 | |||||||||
GPL8304_CE_WBGene00001639_A | |||||||||
GPL8673_M01F1_1P00344 | |||||||||
GPL8673_M01F1_1P00849 | |||||||||
GPL8673_M01F1_1P01161 | |||||||||
GPL9450_M01F1.1 | |||||||||
cea2.c.21842 | |||||||||
Expression_cluster (93) | |||||||||
Interaction (17) | |||||||||
WBProcess | WBbiopr:00000039 | ||||||||
Map_info | Map | III | Position | -6.38882 | Error | 0.063634 | |||
Positive | Positive_clone | M01F1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4362 | |||||||
Pseudo_map_position | |||||||||
Reference (16) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |