WormBase Tree Display for Gene: WBGene00019952

WBGene00019952 SMap: S_parent: Sequence: R08C7
  Identity: Version: 2
    Name: CGC_name: fbxb-74 Person_evidence: WBPerson655
      Sequence_name: R08C7.9
      Molecular_name: R08C7.9
        R08C7.9.1
        CE49020
      Other_name: CELE_R08C7.9 Accession_evidence: NDB BX284604
      Public_name: fbxb-74
    DB_info: Database: AceView gene 4F202
        WormQTL gene WBGene00019952
        WormFlux gene WBGene00019952
        NDB locus_tag CELE_R08C7.9
        Panther gene CAEEL|WormBase=WBGene00019952|UniProtKB=Q21842
          family PTHR22899
        NCBI gene 177210
        RefSeq protein NM_068164.7
        TrEMBL UniProtAcc Q21842
        UniProt_GCRP UniProtAcc Q21842
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-74
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (26)
    RNASeq_FPKM (74)
    Ortholog (36)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including MSpppaaa; PDE socket cell; anterior ganglion (post); head mesodermal cell; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including cyc-1; rsks-1; and hsb-1 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; rotenone; and indole based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated; F-box associated domain, type 2; and F-box domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: R08C7.9
    Corresponding_CDS_history: R08C7.9:wp97
      R08C7.9:wp239
    Corresponding_transcript: R08C7.9.1
    Associated_feature: WBsf651730
      WBsf667878
      WBsf996266
      WBsf996267
      WBsf1017236
      WBsf229961
  Experimental_info: RNAi_result: WBRNAi00017584 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1038663
      Expr1155218
      Expr2011675
      Expr2029914
    Microarray_results (14)
    Expression_cluster (108)
    Interaction: WBInteraction000125737
      WBInteraction000148305
      WBInteraction000152673
      WBInteraction000163588
      WBInteraction000167943
      WBInteraction000171827
      WBInteraction000177584
      WBInteraction000181205
      WBInteraction000181628
      WBInteraction000182127
      WBInteraction000188051
      WBInteraction000188438
      WBInteraction000189829
      WBInteraction000190073
      WBInteraction000190118
      WBInteraction000190719
      WBInteraction000192754
      WBInteraction000193693
      WBInteraction000196182
      WBInteraction000197149
      WBInteraction000198159
      WBInteraction000198634
      WBInteraction000198984
      WBInteraction000199329
      WBInteraction000199445
      WBInteraction000201501
      WBInteraction000203589
      WBInteraction000203956
      WBInteraction000204110
      WBInteraction000204373
      WBInteraction000206038
      WBInteraction000208193
      WBInteraction000210415
      WBInteraction000210526
      WBInteraction000210961
      WBInteraction000211769
      WBInteraction000213087
      WBInteraction000213186
      WBInteraction000213336
      WBInteraction000214533
      WBInteraction000216203
      WBInteraction000218868
      WBInteraction000219291
      WBInteraction000219359
      WBInteraction000219477
      WBInteraction000219876
      WBInteraction000220842
      WBInteraction000222473
      WBInteraction000223171
      WBInteraction000225093
      WBInteraction000225707
      WBInteraction000226843
      WBInteraction000227373
      WBInteraction000227599
      WBInteraction000228515
      WBInteraction000229341
      WBInteraction000229468
      WBInteraction000230588
      WBInteraction000231371
      WBInteraction000231764
      WBInteraction000232492
      WBInteraction000234765
      WBInteraction000237997
      WBInteraction000238350
      WBInteraction000238832
      WBInteraction000239235
      WBInteraction000239682
      WBInteraction000240005
      WBInteraction000241094
      WBInteraction000241111
      WBInteraction000241371
      WBInteraction000241374
      WBInteraction000246290
      WBInteraction000248522
      WBInteraction000248556
      WBInteraction000248940
      WBInteraction000249500
      WBInteraction000249591
      WBInteraction000249637
      WBInteraction000252269
      WBInteraction000252719
      WBInteraction000253027
      WBInteraction000253449
      WBInteraction000255407
      WBInteraction000255919
      WBInteraction000256007
      WBInteraction000256578
      WBInteraction000257421
      WBInteraction000260094
      WBInteraction000261494
      WBInteraction000261787
      WBInteraction000266449
      WBInteraction000267576
      WBInteraction000269630
      WBInteraction000270302
      WBInteraction000270850
      WBInteraction000274597
      WBInteraction000275957
      WBInteraction000276053
      WBInteraction000276725
      WBInteraction000276789
      WBInteraction000277036
      WBInteraction000277291
      WBInteraction000277921
      WBInteraction000280855
      WBInteraction000284608
      WBInteraction000285886
      WBInteraction000286366
      WBInteraction000286410
      WBInteraction000286823
      WBInteraction000287329
      WBInteraction000290226
      WBInteraction000292772
      WBInteraction000294261
      WBInteraction000294336
      WBInteraction000294875
      WBInteraction000294938
      WBInteraction000296625
      WBInteraction000296651
      WBInteraction000296680
      WBInteraction000297745
      WBInteraction000301796
      WBInteraction000302384
      WBInteraction000302532
      WBInteraction000304066
      WBInteraction000304800
      WBInteraction000306485
      WBInteraction000307594
      WBInteraction000308568
      WBInteraction000311784
      WBInteraction000312583
      WBInteraction000315715
      WBInteraction000316444
      WBInteraction000320364
      WBInteraction000321835
      WBInteraction000321850
      WBInteraction000322994
      WBInteraction000323483
      WBInteraction000323615
      WBInteraction000324596
      WBInteraction000324842
      WBInteraction000325937
      WBInteraction000328906
      WBInteraction000331390
      WBInteraction000333450
      WBInteraction000338195
      WBInteraction000339529
      WBInteraction000340281
      WBInteraction000341555
      WBInteraction000344140
      WBInteraction000347092
      WBInteraction000348893
      WBInteraction000350497
      WBInteraction000352517
      WBInteraction000356079
      WBInteraction000356126
      WBInteraction000356833
      WBInteraction000361298
      WBInteraction000363374
      WBInteraction000364813
      WBInteraction000365524
      WBInteraction000366618
      WBInteraction000367181
      WBInteraction000368500
      WBInteraction000368816
      WBInteraction000370220
      WBInteraction000371045
      WBInteraction000371118
      WBInteraction000372499
      WBInteraction000373777
      WBInteraction000374696
      WBInteraction000374764
      WBInteraction000377609
      WBInteraction000378392
      WBInteraction000382844
      WBInteraction000383390
      WBInteraction000383412
      WBInteraction000383589
      WBInteraction000388583
      WBInteraction000389173
      WBInteraction000390327
      WBInteraction000392191
      WBInteraction000392952
      WBInteraction000395222
      WBInteraction000397101
      WBInteraction000409700
      WBInteraction000409796
      WBInteraction000410385
      WBInteraction000414996
      WBInteraction000416134
      WBInteraction000416841
      WBInteraction000417122
      WBInteraction000420332
      WBInteraction000422455
      WBInteraction000423248
      WBInteraction000423996
      WBInteraction000424911
      WBInteraction000428214
      WBInteraction000428334
      WBInteraction000428778
      WBInteraction000430270
      WBInteraction000431763
      WBInteraction000432345
      WBInteraction000438975
      WBInteraction000441011
      WBInteraction000441587
      WBInteraction000442101
      WBInteraction000446356
      WBInteraction000447274
      WBInteraction000448529
      WBInteraction000449788
      WBInteraction000451527
      WBInteraction000452419
      WBInteraction000454269
      WBInteraction000454511
      WBInteraction000454975
      WBInteraction000457054
  Map_info: Map: IV Position: 0.254271 Error: 0.005039
    Positive: Positive_clone: R08C7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene