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WormBase Tree Display for Gene: WBGene00011663

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Name Class

WBGene00011663SMapS_parentSequenceT09F3
IdentityVersion1
NameSequence_nameT09F3.4
Molecular_nameT09F3.4
T09F3.4.1
CE35187
Other_nameCELE_T09F3.4Accession_evidenceNDBBX284602
Public_nameT09F3.4
DB_infoDatabaseAceViewgene2K687
WormQTLgeneWBGene00011663
WormFluxgeneWBGene00011663
NDBlocus_tagCELE_T09F3.4
PanthergeneCAEEL|WormBase=WBGene00011663|UniProtKB=Q22363
familyPTHR10642
NCBIgene174605
RefSeqproteinNM_063837.4
TREEFAMTREEFAM_IDTF342687
TrEMBLUniProtAccQ22363
UniProt_GCRPUniProtAccQ22363
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
GO_annotation00071303
00071304
00071305
Contained_in_operonCEOP2484
Ortholog (19)
ParalogWBGene00011664Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionConcise_descriptionT09F3.4 encodes a novel protein.Curator_confirmedWBPerson1843
Date_last_updated12 Dec 2007 00:00:00
Automated_descriptionPredicted to enable RNA-DNA hybrid ribonuclease activity. Predicted to be involved in DNA replication, removal of RNA primer. Predicted to be located in ribosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDST09F3.4
Corresponding_CDS_historyT09F3.4:wp107
Corresponding_transcriptT09F3.4.1
Other_sequenceCRC11682_1
CR04004
Associated_featureWBsf644608
WBsf222005
Experimental_infoRNAi_resultWBRNAi00052970Inferred_automaticallyRNAi_primary
Expr_patternExpr1026463
Expr1035135
Expr1156573
Expr2006048
Expr2024262
Drives_constructWBCnstr00030489
Construct_productWBCnstr00030489
Microarray_resultsA_12_P155490
A_12_P155491
GPL14144_T09F3.4_309-368_0.937_1_A
GPL19516_CGZ0034432
GPL21109_T09F3.4
GPL8304_CE_WBGene00011663_A
GPL8673_T09F3_4P00124
GPL8673_T09F3_4P00252
GPL8673_T09F3_4P00434
Expression_clusterWBPaper00032031:DConiospora_upregulated_cDNA_24h
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050344:ASER-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055827:pfd-6(gk493446)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056826:SGP_biased
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060661:hypoxia_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061340:g1A_parent
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061613:human-amyloid-beta_upregulated
WBPaper00062143:PQN-59_interacting
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065158:AFD_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00041606:CE_X.nematophila_regulated
Map_infoPositivePositive_cloneT09F3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII2.55964
MethodGene