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WormBase Tree Display for Gene: WBGene00006075

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Name Class

WBGene00006075SMapS_parentSequenceF22B8
IdentityVersion1
NameCGC_namestr-7Person_evidenceWBPerson42
Sequence_nameF22B8.5
Molecular_nameF22B8.5a
F22B8.5a.1
CE51444
F22B8.5c
CE51410
F22B8.5b
F22B8.5c.1
Other_nameCELE_F22B8.5Accession_evidenceNDBBX284605
Public_namestr-7
DB_infoDatabaseAceViewgene5Q578
WormQTLgeneWBGene00006075
WormFluxgeneWBGene00006075
NDBlocus_tagCELE_F22B8.5
PanthergeneCAEEL|Gene_ORFName=CELE_F22B8.5|UniProtKB=A0A131MCW1
familyPTHR46000
NCBIgene184824
RefSeqproteinNM_001322601.3
NM_074651.3
NR_136372.1
TrEMBLUniProtAccA0A131MCW1
A0A131MD12
UniProt_GCRPUniProtAccA0A131MCW1
RNAcentralURSidURS0000A6B89D
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:39WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classstr
Allele (39)
StrainWBStrain00062514
RNASeq_FPKM (74)
GO_annotation00002323
Ortholog (27)
Paralog (267)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
WBPaper00067038
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS296 version of WormBase
Date_last_updated20 Mar 2025 00:00:00
Molecular_infoCorresponding_CDSF22B8.5a
F22B8.5c
Corresponding_CDS_historyF22B8.5:wp252
Corresponding_transcriptF22B8.5b
F22B8.5a.1
F22B8.5c.1
Associated_featureWBsf235116
Experimental_infoRNAi_resultWBRNAi00045302Inferred_automaticallyRNAi_primary
WBRNAi00031263Inferred_automaticallyRNAi_primary
WBRNAi00013744Inferred_automaticallyRNAi_primary
Expr_patternExpr1016069
Expr1032543
Expr1149226
Expr2017082
Expr2035219
Microarray_results (16)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
WBPaper00040285:H2S_12hr_downregulated
WBPaper00040285:H2S_24hr_downregulated
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045918:96h_infection_recovery_upregulated
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00048952:glucose_induced
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049377:MWCNT_upregulated
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050096:P.aeruginosa_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051540:exc-7(csb29);mbl-1(csb30)_upregulated
WBPaper00051558:aging_regulated
WBPaper00053092:procyanidins_upregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053771:up_at_3h-NaCl
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055827:pfd-6(gk493446)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00055944:C.butyricum_vs_OP50_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_adult
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00057265:metaformin_upregulated_OP50
WBPaper00057265:metaformin_upregulated_OP50-MR
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058648:Y37A1B.5(RNAi)_upregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00059117:B.subtilis_downregulated
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00059253:sucrose_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_upregulated_N2
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059735:glucose_upregulated_N2
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:hypoxia_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00060921:cat-2(e1112)_upregulated
WBPaper00060921:tdc-1(n3419)_upregulated
WBPaper00060921:tph-1(mg280)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_downregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061527:C17H12.6-swt-6
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062534:fat-P-80_downregulated
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064532:pals-22(jy3)_downregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065029:cadmium_downregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065288:mdt-15(tm2182)_downregulated
WBPaper00065560:E.coli-HB101_upregulated_F3
WBPaper00065560:E.coli-HB101_upregulated_P0
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00065835:Day5_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:141_0
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066232:hsf-1(RNAi)_downregulated_ash-2
WBPaper00066317:grd-1(RNAi)_downregulated
WBPaper00066349:fasn-1(overexpress)_upregulated
WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
WBPaper00066675:OP50PQE_vs_OP50_downregulated
WBPaper00066919:csr-1(RNAi)_downregulated
WBPaper00066970:lin-29(n333)_upregulated
WBPaper00066970:rict-1(mg360)_upregulated
WBPaper00067368:pabp-2(RNAi)_upregulated_N2
WBPaper00067368:pabp-2(RNAi)_upregulated_ubr-5(miy31)
WBPaper00067368:ubr-5(miy31)_downregulated_N2
WBPaper00067368:ubr-5(miy31)_downregulated_pabp-2(RNAi)
WBPaper00067391:atfs-1(RNAi)_downregulated_eat-2(ad465)
WBPaper00067474:HSF-1(OverExpress)_upregulated
WBPaper00067499:Day10_vs_Day1_downregulated_Illumina
WBPaper00067499:Day15_vs_Day1_downregulated_Illumina
WBPaper00067518:food_downregulated_N2
WBPaper00067530:Milk-protein_upregulated
cgc4489_group_10
WBPaper00029437:dcr-1_upregulated
WBPaper00032062:age_regulated_genes
WBPaper00037695:WC_5-day
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040963:TA300_up
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042258:DA1877_downregulated_YoungAdult
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00055899:2,4-Dinitroanisole_regulated
WBPaper00055899:nitroguanidine_regulated
Interaction (16)
Map_infoMapVPosition9.54262Error0.009244
PositivePositive_cloneF22B8Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00060701
WBPaper00062388
WBPaper00066317
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene