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WormBase Tree Display for Gene: WBGene00004342

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Name Class

WBGene00004342EvidenceCGC_data_submission
SMapS_parentSequenceC02F5
IdentityVersion2
NameCGC_namerfs-1Person_evidenceWBPerson1551
Sequence_nameC30A5.2
Molecular_nameC30A5.2
C30A5.2.1
CE00094
C30A5.2.2
Other_namehim-15Paper_evidenceWBPaper00031859
Person_evidenceWBPerson261
CELE_C30A5.2Accession_evidenceNDBBX284603
Public_namerfs-1
DB_infoDatabaseAceViewgene3J321
WormQTLgeneWBGene00004342
NDBlocus_tagCELE_C30A5.2
PanthergeneCAEEL|WormBase=WBGene00004342|UniProtKB=P34348
familyPTHR46457
NCBIgene24104262
RefSeqproteinNM_001382934.2
SwissProtUniProtAccP34348
UniProt_GCRPUniProtAccP34348
OMIMgene602954
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
210 Sep 2008 11:35:17WBPerson2970EventAcquires_mergeWBGene00001873
Name_changeOther_namehim-15
Acquires_mergeWBGene00001873
StatusLive
Gene_info (11)
Disease_infoPotential_modelDOID:5683Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9823)
Molecular_infoCorresponding_CDSC30A5.2
Corresponding_transcriptC30A5.2.1
C30A5.2.2
Associated_featureWBsf659239
WBsf659240
WBsf981518
WBsf993273
WBsf1015375
WBsf225372
Experimental_infoRNAi_resultWBRNAi00041516Inferred_automaticallyRNAi_primary
WBRNAi00005867Inferred_automaticallyRNAi_primary
WBRNAi00011371Inferred_automaticallyRNAi_primary
WBRNAi00106784Inferred_automaticallyRNAi_primary
WBRNAi00028361Inferred_automaticallyRNAi_primary
WBRNAi00041517Inferred_automaticallyRNAi_primary
Expr_patternExpr1022783
Expr1032160
Expr1145540
Expr2015310
Expr2033544
Drives_constructWBCnstr00035553
Construct_productWBCnstr00035553
Microarray_results (17)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045314:S.aureus-induced_N2
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00047131:daf-2(e1370)_downregulated_N2-background
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:body-muscle_enriched
WBPaper00050990:body-muscle_expressed
WBPaper00051039:germline_enriched
WBPaper00051558:aging_regulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056284:ints-6(t1903)_downregulated
WBPaper00056826:hmc_biased
WBPaper00057288:Cold_upregulated_transcript
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00061274:microgravity_downregulated
WBPaper00061340:K_Kprime
WBPaper00061340:Neuroblast_ALA_RMED
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00062146:MOG-7-degron_1h_regulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00065158:25C_vs_15C_downregulated_AFD
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065258:anchor-cell_depleted
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065841:23_0
WBPaper00065841:110_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066085:sin-3(syb2172)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00026929:Resveratrol_regulated_N2
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00037695:WC_5-day
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00048567:dnj-14_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (33)
Map_infoMapIIIPosition-0.356587Error0.001363
PositivePositive_cloneC30A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4934
5606
Pos_neg_data10772
Pseudo_map_position
Reference (16)
RemarkSequence connection from [Boulton S, Vidal M]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene