WormBase Tree Display for Gene: WBGene00001569

WBGene00001569 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: F52D2
  Identity: Version: 2
    Name: CGC_name: meg-3 Person_evidence: WBPerson261
            WBPerson9884
            WBPerson575
      Sequence_name: F52D2.4
      Molecular_name: F52D2.4
        F52D2.4.1
        CE23757
      Other_name: gei-12 Person_evidence: WBPerson1796
        CELE_F52D2.4 Accession_evidence: NDB BX284606
      Public_name: meg-3
    DB_info: Database: AceView gene XC606
        WormQTL gene WBGene00001569
        WormFlux gene WBGene00001569
        NDB locus_tag CELE_F52D2.4
        NCBI gene 180510
        RefSeq protein NM_075966.6
        TREEFAM TREEFAM_ID TF322203
        TrEMBL UniProtAcc Q9TXM1
        UniProt_GCRP UniProtAcc Q9TXM1
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 15 Aug 2014 16:05:09 WBPerson2970 Name_change: CGC_name: meg-3
                Other_name: gei-12
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: meg
    Allele: WBVar00252774 Inferred_automatically (12)
      WBVar02156940 Inferred_automatically: From strain object: JH3475
      WBVar02149350
      WBVar02156938
      WBVar01600913
      WBVar01757516
      WBVar01600914
      WBVar01600915
      WBVar01123578
      WBVar01600916
      WBVar01123579
      WBVar01123580
      WBVar01123581
      WBVar01123582
      WBVar01123584
      WBVar01123585
      WBVar01123586
      WBVar01123587
      WBVar01123588
      WBVar01123589
      WBVar01123590
      WBVar01123591
      WBVar01123592
      WBVar01123593
      WBVar01123594
      WBVar02121915
      WBVar01123595
      WBVar01123596
      WBVar01123597
      WBVar01123598
      WBVar01123599
      WBVar01123600
      WBVar01123601
      WBVar01123602
      WBVar01123603
      WBVar01123604
      WBVar01123605
      WBVar01499751
      WBVar00075685
      WBVar01493688
      WBVar01813683
      WBVar01467799
      WBVar01467800
      WBVar01499636
      WBVar00252952
      WBVar02138800
      WBVar00495778
      WBVar00495779
      WBVar02120741
      WBVar00495780
      WBVar00495781
      WBVar00495782
      WBVar00495783
      WBVar00495784
      WBVar00495785
      WBVar00495786
      WBVar00495787
      WBVar00495788
      WBVar01619166
    Strain (23)
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog: chrX_pilon.g18541 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00018688 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00016485 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00219451 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: meg-3 encodes a novel protein that affects embryonic viability and development of the hypodermis; MEG-3 interacts with GEX-3 in yeast two-hybrid assays, and is expressed in all somatic cells. Paper_evidence: WBPaper00005194
          Curator_confirmed: WBPerson48
            WBPerson1843
          Date_last_updated: 30 Jan 2015 00:00:00
      Automated_description: Involved in embryo development; gamete generation; and organelle localization. Located in P granule. Expressed in several structures, including germ cell and oocyte. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: F52D2.4
    Corresponding_transcript: F52D2.4.1
    Associated_feature: WBsf653716
      WBsf1004196
      WBsf1022389
      WBsf237042
  Experimental_info: RNAi_result: WBRNAi00024287 Inferred_automatically: RNAi_primary
      WBRNAi00047973 Inferred_automatically: RNAi_primary
      WBRNAi00061662 Inferred_automatically: RNAi_primary
      WBRNAi00015403 Inferred_automatically: RNAi_primary
      WBRNAi00032611 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2089
      Expr12114
      Expr12116
      Expr1030938
      Expr1151789
      Expr2013510
      Expr2031744
    Drives_construct: WBCnstr00021878
      WBCnstr00037968
    Construct_product: WBCnstr00021878
      WBCnstr00022631
      WBCnstr00037968
      WBCnstr00040205
    Regulate_expr_cluster: WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
      WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
      WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
      WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_upregulated_endo-siRNA_targets
      WBPaper00057162:meg-3_meg-4_downregulated_sRNA
      WBPaper00057162:meg-3_meg-4_upregulated_sRNA
      WBPaper00059174:MEG-3_interacting
    Antibody: WBAntibody00002617
    Microarray_results (17)
    Expression_cluster (223)
    Interaction (100)
  Map_info: Map: X Position: -17.0968 Error: 0.017536
    Positive: Positive_clone: F52D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (24)
  Remark: Sequence connection from [Qadota H, Kaibuchi K]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene