WormBase Tree Display for Gene: WBGene00000484
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WBGene00000484 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F38G1 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | che-2 | Person_evidence | WBPerson261 | |||||
Sequence_name | F38G1.1 | ||||||||
Molecular_name | F38G1.1 | ||||||||
F38G1.1.1 | |||||||||
CE25876 | |||||||||
Other_name | CELE_F38G1.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | che-2 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | che | ||||||||
Reference_allele | WBVar00143695 | ||||||||
Allele | WBVar00143695 | Inferred_automatically | From strain object: CB1033 | ||||||
From strain object: DR170 | |||||||||
From strain object: OS2723 | |||||||||
From strain object: OS2728 | |||||||||
WBVar00088591 | |||||||||
WBVar00089126 | |||||||||
WBVar00089152 | |||||||||
WBVar00242501 | |||||||||
WBVar01813618 | |||||||||
WBVar01618087 | |||||||||
WBVar01618088 | |||||||||
WBVar01618089 | |||||||||
WBVar01618090 | |||||||||
WBVar01618091 | |||||||||
WBVar01618092 | |||||||||
WBVar01618093 | |||||||||
WBVar01618094 | |||||||||
WBVar01618095 | |||||||||
WBVar01618096 | |||||||||
WBVar01618097 | |||||||||
WBVar01618098 | |||||||||
WBVar01618099 | |||||||||
WBVar01618100 | |||||||||
WBVar01618101 | |||||||||
WBVar01618102 | |||||||||
WBVar01618103 | |||||||||
WBVar01498638 | |||||||||
WBVar01639563 | |||||||||
WBVar01486154 | |||||||||
WBVar01113124 | |||||||||
WBVar01113125 | |||||||||
WBVar01113126 | |||||||||
WBVar01113127 | |||||||||
WBVar02008963 | |||||||||
WBVar01113128 | |||||||||
WBVar02008964 | |||||||||
WBVar01113129 | |||||||||
WBVar01113130 | |||||||||
WBVar00492403 | |||||||||
WBVar01113131 | |||||||||
WBVar01113132 | |||||||||
WBVar00492404 | |||||||||
WBVar01113133 | |||||||||
WBVar00492405 | |||||||||
WBVar01113134 | |||||||||
WBVar00492406 | |||||||||
WBVar02138573 | |||||||||
WBVar00492407 | |||||||||
WBVar01113135 | |||||||||
WBVar01113136 | |||||||||
WBVar00492408 | |||||||||
WBVar00492409 | |||||||||
WBVar01113137 | |||||||||
WBVar01113138 | |||||||||
WBVar00492410 | |||||||||
WBVar01113139 | |||||||||
WBVar00492411 | |||||||||
WBVar00492412 | |||||||||
WBVar01113140 | |||||||||
WBVar01113141 | |||||||||
WBVar00492413 | |||||||||
WBVar00492414 | |||||||||
WBVar01113142 | |||||||||
WBVar00492415 | |||||||||
WBVar01113143 | |||||||||
WBVar01113144 | |||||||||
WBVar00492416 | |||||||||
WBVar01113145 | |||||||||
WBVar01113146 | |||||||||
WBVar01113147 | |||||||||
WBVar01113148 | |||||||||
WBVar00252189 | |||||||||
WBVar01113149 | |||||||||
WBVar01113150 | |||||||||
WBVar01113151 | |||||||||
WBVar01113152 | |||||||||
WBVar01113153 | |||||||||
WBVar01113154 | |||||||||
WBVar01113155 | |||||||||
WBVar01113156 | |||||||||
WBVar01113157 | |||||||||
WBVar01113158 | |||||||||
WBVar01113159 | |||||||||
WBVar01113160 | |||||||||
WBVar01113161 | |||||||||
WBVar01113162 | |||||||||
WBVar01113163 | |||||||||
WBVar01499636 | |||||||||
WBVar01986884 | |||||||||
WBVar01689973 | |||||||||
WBVar00089146 | |||||||||
WBVar01600305 | |||||||||
WBVar00074304 | |||||||||
WBVar00074305 | |||||||||
WBVar01823932 | |||||||||
WBVar01823933 | |||||||||
Legacy_information | e1033 : non-chemotactic to sodium ion slightly small defective osmotic avoidance defective dauer formation males impotent; no FITC uptake; ciliated neurons have abnormal stunted ultrastructure. ES2 ME0. NA1. | ||||||||
See also e1033 | |||||||||
[C.elegansII] e1033 : non-chemotactic to sodium ion; slightly small; defective osmotic avoidance; defective dauer formation; males impotent; Dyf (no FITC uptake); ciliated neurons have abnormal stunted ultrastructure. ES2. ME0.OA5: m127, mn330mut, mn395 etc. [Lewis and Hodgkin 1977; Starich et al. 1995; DR; SP; NJ] | |||||||||
Strain | WBStrain00030520 | ||||||||
WBStrain00030521 | |||||||||
WBStrain00004231 | |||||||||
WBStrain00006208 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Ortholog (39) | |||||||||
Structured_description | Concise_description | che-2 encodes a protein that contains G-protein beta-like WD-40 repeats that affects chemotaxis, dauer formation, and longevity; expressed in the cilia of most ciliated sensory neurons, some head neurons, and male tail rays. | Paper_evidence | WBPaper00001482 | |||||
WBPaper00001786 | |||||||||
WBPaper00002033 | |||||||||
WBPaper00003761 | |||||||||
WBPaper00003977 | |||||||||
WBPaper00004692 | |||||||||
WBPaper00005596 | |||||||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Involved in several processes, including dauer larval development; negative regulation of transforming growth factor beta receptor signaling pathway; and positive regulation of locomotion involved in locomotory behavior. Located in ciliary basal body and non-motile cilium. Expressed in neurons. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy 2. Is an ortholog of human IFT80 (intraflagellar transport 80). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0110086 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29262) | ||||
Molecular_info | Corresponding_CDS | F38G1.1 | |||||||
Corresponding_transcript | F38G1.1.1 | ||||||||
Other_sequence | Acan_isotig12713 | ||||||||
JI226764.1 | |||||||||
Associated_feature | WBsf042305 | ||||||||
WBsf647785 | |||||||||
WBsf1003791 | |||||||||
WBsf235268 | |||||||||
Experimental_info | RNAi_result | WBRNAi00014580 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00068042 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00067404 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00067940 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046733 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1157 | ||||||||
Expr10123 | |||||||||
Expr1024294 | |||||||||
Expr1030285 | |||||||||
Expr1150609 | |||||||||
Expr2009965 | |||||||||
Expr2028205 | |||||||||
Drives_construct (17) | |||||||||
Construct_product (11) | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (154) | |||||||||
Interaction (81) | |||||||||
Map_info | Map | X | Position | -19.7593 | Error | 0.046333 | |||
Well_ordered | |||||||||
Positive | Positive_clone | F38G1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | 2_point | 3385 | |||||||
Multi_point | 1213 | ||||||||
1585 | |||||||||
1856 | |||||||||
2320 | |||||||||
2431 | |||||||||
2432 | |||||||||
4432 | |||||||||
Pos_neg_data | 5455 | ||||||||
5461 | |||||||||
5466 | |||||||||
5470 | |||||||||
5474 | |||||||||
5478 | |||||||||
5482 | |||||||||
5486 | |||||||||
5490 | |||||||||
5494 | |||||||||
Reference (127) | |||||||||
Remark | Sequence connection from [Fujiwara M, Katsura I] | ||||||||
Method | Gene |