Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Feature: WBsf160612

expand all nodes | collapse all nodes | view schema

Name Class

WBsf160612SMapS_parentSequenceF52C6
Sequence_detailsFlanking_sequencesTTGTTTCTTTAATGAACGCTTAATAATTTTTTTAGACGTAAAAATCTATTTTCAGTGATT
Mapping_targetF52C6
Source_location190CHROMOSOME_II19273481927349
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionpolyA_site defined by RNASeq short reads (Hillier et al.)
Defined_byDefined_by_sequencemid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_polyA_II_1927348_-_wb170
mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_polyA_II_1927348_-_wb170
Young_Adult_25dC_46hrs_post-L1_bundle_of_reads_supporting_polyA_II_1927348_-_wb170
elegans_PE_SS_GG7197|c0_g1_i3Inferred_automaticallymake_missing_tsl_features.pl
Defined_by_paperWBPaper00037808
WBPaper00037948
Defined_by_analysisRNASeq_Hillier.L3_larva
RNASeq_Hillier.L4_larva
RNASeq_Hillier.Young_Adult
RNASeq_Fire.all_stages_ssRNALigSeq
AssociationsAssociated_with_transcriptF52C6.2.1
Remark[110125 gw3] This polyA_site feature was defined by the Bartel paper.
Bartel data confident_cleavagesite score: 709.0
MethodpolyA_site