WormBase Tree Display for Expression_cluster: [cgc6390]:intrinsic
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| [cgc6390]:intrinsic | Description | Germline-intrinsic transcripts. |
|---|---|---|
| Species | Caenorhabditis elegans | |
| Algorithm | Comparisons were made between genotypes by subtracting the mean log value of one ratio from another, and the significance of the difference was evaluated using Student t-test for two populations. For the fem-3(gf) versus fem-1(lf) direct comparison, authors performed the same analysis, except they used a Students t-test for one population. Author chose a combination of a twofold difference with a t value exceeding 99% confidence (P < 0.01), because these criteria allowed the inclusion of essentially all genes that had previously been identified as germline-enriched in a wt/glp-4 hermaphrodite comparison. Additionally, requiring a twofold difference reduced false positives, as the number of genes with two-fold difference and a P<0.01 only included ~100 genes more than with P < 0.001, and almost all genes showed germline expression by in situ hybridization. | |
| Reference | WBPaper00006390 | |
| Microarray_results (1248) | ||
| Gene (1341) | ||
| Attribute_of | Microarray_experiment (6) | |
| Remark | These are gene expression categories discussed in the paper. |
