WormBase Tree Display for CDS: ZK945.3
expand all nodes | collapse all nodes | view schema
ZK945.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK945 | |||
Structure | Source_exons | 1 | 120 | |||
171 | 473 | |||||
521 | 1025 | |||||
1078 | 1337 | |||||
1384 | 2083 | |||||
2131 | 2543 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q09622 | ||
UniProt | UniProtAcc | Q09622 | ||||
AlphaFold | entry | Q09622 | ||||
UniProt_GCRP | UniProtAcc | Q09622 | ||||
NCBI_protein | GI_number | GI:3881888 | ||||
TREEFAM | TREEFAM_ID | TF312954 | ||||
Protein_id | CHROMOSOME_II | CAA88437 | 1 | |||
DB_remark | PUF-12 protein; contains similarity to Pfam domain PF08144 (CPL (NUC119) domain); contains similarity to Interpro domains IPR001313 (Pumilio RNA-binding repeat), IPR040059 (Pumilio homologue 3), IPR011989 (Armadillo-like helical), IPR012959 (CPL domain), IPR016024 (Armadillo-type fold) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00014165 | ||||
Corresponding_transcript | ZK945.3.1 | |||||
Corresponding_protein | CE01734 | |||||
Corresponding_PCR_product | cenix:200-a11 | |||||
mv_ZK945.3 | ||||||
sjj2_ZK945.3 | ||||||
sjj_ZK945.3 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (97) | ||||||
RNAi_result | WBRNAi00007630 | |||||
WBRNAi00059847 | ||||||
WBRNAi00077915 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Pumilio domain-containing protein 12 | Accession_evidence | UniProt | SP:Q09622 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf002493 | |||||
Method | curated |