WormBase Tree Display for CDS: ZK484.7
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ZK484.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK484 | |||
Structure | Source_exons | 1 | 19 | |||
127 | 224 | |||||
288 | 593 | |||||
640 | 789 | |||||
836 | 1011 | |||||
1055 | 1211 | |||||
1258 | 1386 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O44901 | ||
UniProt | UniProtAcc | O44901 | ||||
AlphaFold | entry | O44901 | ||||
UniProt_GCRP | UniProtAcc | O44901 | ||||
NCBI_protein | GI_number | GI:351058358 | ||||
TREEFAM | TREEFAM_ID | TF316265 | ||||
Protein_id | CHROMOSOME_I | CCD65804 | 1 | |||
DB_remark | contains similarity to Pfam domain PF00102 (Protein-tyrosine phosphatase); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR052782 (Oocyte-to-zygote transition regulator), IPR029021 (Protein-tyrosine phosphatase-like), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00022753 | ||||
Corresponding_transcript | ZK484.7.1 | |||||
Corresponding_protein | CE15349 | |||||
Corresponding_PCR_product | cenix:26-a10 | |||||
mv_ZK484.7 | ||||||
sjj_ZK484.7 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (21) | ||||||
RNAi_result | WBRNAi00038309 | |||||
WBRNAi00004940 | ||||||
WBRNAi00094982 | ||||||
WBRNAi00059451 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Protein-tyrosine phosphatase | Accession_evidence | UniProt | TR:O44901 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |