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WormBase Tree Display for CDS: ZK1225.6

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Name Class

ZK1225.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZK1225
StructureSource_exons1324
DB_infoDatabaseSwissProtUniProtAccQ9XXL3
UniProtUniProtAccQ9XXL3
AlphaFoldentryQ9XXL3
UniProt_GCRPUniProtAccQ9XXL3
NCBI_proteinGI_numberGI:3881538
Protein_idCHROMOSOME_ICAA183731
DB_remarkSSP-31 protein; contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold), IPR051774 (Sperm-specific class P)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00006048
Corresponding_transcriptZK1225.6.1
Corresponding_proteinCE19345
Corresponding_PCR_productcenix:217-a2
mv_ZK1225.6
sjj_ZK1225.6
Corresponding_oligo_set (15)
Matching_cDNAyoung_adult_Nanopore_Roach_40164
male_Nanopore_Roach_39324
male_Nanopore_Roach_39277
adult_Nanopore_Roach_34555
L4_Nanopore_Roach_22125
RNAi_resultWBRNAi00004917
WBRNAi00059162
WBRNAi00038175
Microarray_results (16)
Brief_identificationSperm-specific class P protein 31Accession_evidenceUniProtSP:Q9XXL3
RNASeq_FPKM (74)
Methodcurated