WormBase Tree Display for CDS: ZK1225.6
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ZK1225.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK1225 | |||
Structure | Source_exons | 1 | 324 | |||
DB_info | Database | SwissProt | UniProtAcc | Q9XXL3 | ||
UniProt | UniProtAcc | Q9XXL3 | ||||
AlphaFold | entry | Q9XXL3 | ||||
UniProt_GCRP | UniProtAcc | Q9XXL3 | ||||
NCBI_protein | GI_number | GI:3881538 | ||||
Protein_id | CHROMOSOME_I | CAA18373 | 1 | |||
DB_remark | SSP-31 protein; contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold), IPR051774 (Sperm-specific class P) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006048 | ||||
Corresponding_transcript | ZK1225.6.1 | |||||
Corresponding_protein | CE19345 | |||||
Corresponding_PCR_product | cenix:217-a2 | |||||
mv_ZK1225.6 | ||||||
sjj_ZK1225.6 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA | young_adult_Nanopore_Roach_40164 | |||||
male_Nanopore_Roach_39324 | ||||||
male_Nanopore_Roach_39277 | ||||||
adult_Nanopore_Roach_34555 | ||||||
L4_Nanopore_Roach_22125 | ||||||
RNAi_result | WBRNAi00004917 | |||||
WBRNAi00059162 | ||||||
WBRNAi00038175 | ||||||
Microarray_results (16) | ||||||
Brief_identification | Sperm-specific class P protein 31 | Accession_evidence | UniProt | SP:Q9XXL3 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |