WormBase Tree Display for CDS: Y27F2A.6
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| Y27F2A.6 | SMap | S_parent | Sequence | Y27F2A | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 96 | |||
| 158 | 350 | |||||
| 414 | 844 | |||||
| 891 | 951 | |||||
| 1001 | 1069 | |||||
| 1383 | 1495 | |||||
| 1539 | 1760 | |||||
| 1814 | 1991 | |||||
| 2037 | 2137 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9N548 | ||
| UniProt | UniProtAcc | Q9N548 | ||||
| AlphaFold | entry | Q9N548 | ||||
| UniProt_GCRP | UniProtAcc | Q9N548 | ||||
| NCBI_protein | GI_number | GI:351059284 | ||||
| TREEFAM | TREEFAM_ID | TF320732 | ||||
| Protein_id | CHROMOSOME_II | CCD73685 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF07801 (Protein of unknown function (DUF1647)); contains similarity to Interpro domain IPR012444 (Protein of unknown function DUF1647) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00021298 | ||||
| Corresponding_transcript | Y27F2A.6.1 | |||||
| Corresponding_protein | CE21493 | |||||
| Corresponding_PCR_product | TH:195-g7_1 | |||||
| cenix:168-e2 | ||||||
| cenix:195-g7_1 | ||||||
| mv_Y27F2A.c | ||||||
| sjj_Y27F2A.c | ||||||
| Corresponding_oligo_set (11) | ||||||
| Matching_cDNA | male_Nanopore_Roach_48736 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_30082 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3458|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_168683 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_174541 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR125B7_1 | Inferred_automatically | transcript_builder.pl | ||||
| FN904052 | Inferred_automatically | transcript_builder.pl | ||||
| FN904051 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF125B7_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00023722 | |||||
| WBRNAi00024009 | ||||||
| WBRNAi00020149 | ||||||
| WBRNAi00103302 | ||||||
| WBRNAi00045331 | ||||||
| WBRNAi00013760 | ||||||
| WBRNAi00036746 | ||||||
| WBRNAi00023435 | ||||||
| WBRNAi00055759 | ||||||
| WBRNAi00023210 | ||||||
| Microarray_results (12) | ||||||
| Brief_identification | Alpha-2,3-sialyltransferase | Accession_evidence | UniProt | TR:Q9N548 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
