WormBase Tree Display for CDS: T28A8.4
expand all nodes | collapse all nodes | view schema
T28A8.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T28A8 | |||
Structure | Source_exons | 1 | 143 | |||
186 | 299 | |||||
353 | 625 | |||||
671 | 784 | |||||
832 | 978 | |||||
1036 | 1372 | |||||
1420 | 1635 | |||||
1684 | 1749 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9XU05 | ||
UniProt | UniProtAcc | Q9XU05 | ||||
AlphaFold | entry | Q9XU05 | ||||
UniProt_GCRP | UniProtAcc | Q9XU05 | ||||
NCBI_protein | GI_number | GI:3880338 | ||||
TREEFAM | TREEFAM_ID | TF322256 | ||||
Protein_id | CHROMOSOME_III | CAB07288 | 1 | |||
DB_remark | contains similarity to Pfam domain PF04435 (Domain of unknown function (DUF545)); contains similarity to Interpro domains IPR006570 (SPK domain), IPR053315 (Peptidase C14A) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00012110 | ||||
Corresponding_transcript | T28A8.4.1 | |||||
Corresponding_protein | CE18975 | |||||
Corresponding_PCR_product | TH:321E7 | |||||
cenix:321-e7 | ||||||
mv_T28A8.4 | ||||||
sjj_T28A8.4 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (30) | ||||||
RNAi_result | WBRNAi00006075 | |||||
WBRNAi00019374 | ||||||
WBRNAi00036065 | ||||||
WBRNAi00054373 | ||||||
Microarray_results (16) | ||||||
Brief_identification | SPK domain-containing protein | Accession_evidence | UniProt | TR:Q9XU05 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf020554 | |||||
Method | curated |