WormBase Tree Display for CDS: T09F3.3
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T09F3.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T09F3 | |||
Structure | Source_exons | 1 | 523 | |||
576 | 1008 | |||||
1057 | 1126 | |||||
DB_info | Database | KEGG | KEGG_id | 1.2.1.12 | ||
SwissProt | UniProtAcc | P04970 | ||||
UniProt | UniProtAcc | P04970 | ||||
AlphaFold | entry | P04970 | ||||
UniProt_GCRP | UniProtAcc | P04970 | ||||
NCBI_protein | GI_number | GI:3879670 | ||||
Protein_id | CHROMOSOME_II | CAA88870 | 1 | |||
DB_remark | GPD-1 protein; contains similarity to Pfam domains PF00044 (Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain), PF02800 (Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain); contains similarity to Interpro domains IPR020828 (Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain), IPR036291 (NAD(P)-binding domain superfamily), IPR020831 (Glyceraldehyde/Erythrose phosphate dehydrogenase family), IPR006424 (Glyceraldehyde-3-phosphate dehydrogenase, type I), IPR020829 (Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00001683 | ||||
Corresponding_transcript | T09F3.3.1 | |||||
Corresponding_protein | CE02343 | |||||
Corresponding_PCR_product | cenix:202-c4 | |||||
mv_CAA36900 | ||||||
sjj_T09F3.3 | ||||||
Corresponding_oligo_set | A_12_P101710 | |||||
GPL19516_CGZ0034430 | ||||||
GPL21109_T09F3.3.1 | ||||||
GPL3518_CE02343 | ||||||
GPL8304_CE_WBGene00001683_A | ||||||
Matching_cDNA (72) | ||||||
RNAi_result | WBRNAi00018506 | |||||
WBRNAi00052969 | ||||||
WBRNAi00008168 | ||||||
WBRNAi00008043 | ||||||
WBRNAi00114592 | ||||||
WBRNAi00046227 | ||||||
WBRNAi00014257 | ||||||
WBRNAi00115891 | ||||||
Microarray_results | SMD_T09F3.3 | |||||
A_12_P101710 | ||||||
GPL19516_CGZ0034430 | ||||||
GPL19516_CGZ0034431 | ||||||
GPL21109_T09F3.3.1 | ||||||
GPL3518_CE02343 | ||||||
GPL8304_CE_WBGene00001683_A | ||||||
Brief_identification | Glyceraldehyde-3-phosphate dehydrogenase 1 | Accession_evidence | UniProt | SP:P04970 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf008538 | |||||
Method | curated |