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WormBase Tree Display for CDS: SRAE_X000179100

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Name Class

SRAE_X000179100SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons164
112282
325847
8911455
15052185
DB_infoDatabaseUniProtUniProtAccA0A090KVZ4
UniProtIdA0A090KVZ4_STRRB
DB_remarkcontains similarity to Pfam domains PF01549 (ShK domain-like), PF03098 (Animal haem peroxidase); contains similarity to Interpro domains IPR019791 (Haem peroxidase, animal-type), IPR003582 (ShKT domain), IPR037120 (Haem peroxidase domain superfamily, animal type), IPR010255 (Haem peroxidase superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00267368
Corresponding_transcriptSRAE_X000179100.1
SRAE_X000179100.2
Corresponding_proteinSRP00454
Matching_cDNABI073673Inferred_automaticallytranscript_builder.pl
FC816511Inferred_automaticallytranscript_builder.pl
FC811037Inferred_automaticallytranscript_builder.pl
Brief_identificationPeroxidasin-like protein
RNASeq_FPKMWBls:0000677166.354From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
166.982From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
169.102From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
170.253From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
171.847From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
173.788From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:00006783.06589From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
3.65136From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
5.04055From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
5.56425From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
5.77528From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
5.96789From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
6.22641From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
6.32275From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:000068023.34From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068213.7148From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated