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WormBase Tree Display for CDS: SRAE_X000177500

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Name Class

SRAE_X000177500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons11647
DB_infoDatabaseUniProtUniProtAccA0A090KRM0
UniProtIdA0A090KRM0_STRRB
DB_remarkcontains similarity to Pfam domains PF17767 (Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain), PF17956 (Nicotinate phosphoribosyltransferase C-terminal domain); contains similarity to Interpro domains IPR006405 (Nicotinate phosphoribosyltransferase pncB-type), IPR007229 (Nicotinate phosphoribosyltransferase family), IPR013785 (Aldolase-type TIM barrel), IPR036068 (Nicotinate phosphoribosyltransferase-like, C-terminal), IPR040727 (Nicotinate phosphoribosyltransferase, N-terminal domain), IPR041619 (Nicotinate phosphoribosyltransferase C-terminal domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267352
Corresponding_transcriptSRAE_X000177500.1
Corresponding_proteinSRP02019
Brief_identificationNicotinate phosphoribosyltransferase
RNASeq_FPKMWBls:000067740.7536From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
41.2733From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
44.4837From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
44.7755From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
50.1984From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
51.7945From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067821.4406From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
23.6288From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
47.6294From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
48.1323From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
48.9502From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
49.5227From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
50.5568From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
51.413From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:000068037.1714From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.893855From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated