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WormBase Tree Display for CDS: SRAE_X000176000

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Name Class

SRAE_X000176000SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons157
118402
490591
12631472
15271679
DB_infoDatabaseUniProtUniProtAccA0A090KRK4
UniProtIdA0A090KRK4_STRRB
DB_remarkcontains similarity to Pfam domain PF00335 (Tetraspanin family); contains similarity to Interpro domains IPR000301 (Tetraspanin, animals), IPR018499 (Tetraspanin/Peripherin), IPR008952 (Tetraspanin, EC2 domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267337
Corresponding_transcriptSRAE_X000176000.1
Corresponding_proteinSRP07135
Brief_identificationBcDNA.LD19727
RNASeq_FPKMWBls:00006772.7729From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
2.9029From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
3.73988From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
3.99576From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
5.33429From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
5.52879From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:00006782.50866From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
3.87913From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
6.11586From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
6.2277From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
6.64755From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
6.94714From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
7.20894From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
7.75339From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:00006807.85666From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823.06526From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated