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WormBase Tree Display for CDS: SRAE_X000173300

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Name Class

SRAE_X000173300SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons178
513585
648960
10252278
23252462
25152704
DB_infoDatabaseUniProtUniProtAccA0A090KXK5
UniProtIdA0A090KXK5_STRRB
DB_remarkcontains similarity to Pfam domains PF04960 (Glutaminase), PF12796 (Ankyrin repeats (3 copies)), PF17959 (EF-hand domain); contains similarity to Interpro domains IPR015868 (Glutaminase), IPR002110 (Ankyrin repeat), IPR041541 (Glutaminase, EF-hand domain), IPR012338 (Beta-lactamase/transpeptidase-like), IPR020683 (Domain of unknown function DUF3447), IPR036770 (Ankyrin repeat-containing domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00267310
Corresponding_transcriptSRAE_X000173300.1
Corresponding_proteinSRP09503
Matching_cDNAFC816069Inferred_automaticallytranscript_builder.pl
BI397252Inferred_automaticallytranscript_builder.pl
Brief_identificationNo extended memory
RNASeq_FPKMWBls:000067711.4199From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
11.4838From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
12.1992From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
12.5976From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
14.485From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
14.6317From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006781.2822From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
1.36884From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
1.43324From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
1.57635From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
1.6338From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
1.69269From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
2.00637From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
2.17447From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:00006809.08404From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.49372From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated