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WormBase Tree Display for CDS: SRAE_X000168900

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Name Class

SRAE_X000168900SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1407
4522318
DB_infoDatabaseUniProtUniProtAccA0A090MPB8
UniProtIdA0A090MPB8_STRRB
DB_remarkcontains similarity to Pfam domains PF00326 (Prolyl oligopeptidase family), PF02897 (Prolyl oligopeptidase, N-terminal beta-propeller domain); contains similarity to Interpro domains IPR001375 (Peptidase S9, prolyl oligopeptidase, catalytic domain), IPR002470 (Peptidase S9A, prolyl oligopeptidase), IPR029058 (Alpha/Beta hydrolase fold), IPR023302 (Peptidase S9A, N-terminal domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267264
Corresponding_transcriptSRAE_X000168900.1
Corresponding_proteinSRP03102
Brief_identificationProlyl endopeptidase
RNASeq_FPKMWBls:00006770.024047From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
0.059956From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
0.060846From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
0.068255From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
0.068855From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
0.082352From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067815.2419From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
16.0638From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
33.5016From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
34.5595From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
35.4211From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
35.9555From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
38.6851From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
39.0554From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:00006800.188688From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated