Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: SRAE_X000167500

expand all nodes | collapse all nodes | view schema

Name Class

SRAE_X000167500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons11035
11341187
12811778
25722742
27982965
30185142
54488145
81958453
DB_infoDatabaseUniProtUniProtAccA0A090KXE5
UniProtIdA0A090KXE5_STRRB
DB_remarkcontains similarity to Pfam domains PF12166 (Piezo non-specific cation channel, R-Ras-binding domain), PF15917 (Piezo); contains similarity to Interpro domains IPR031805 (Piezo domain), IPR027272 (Piezo family), IPR031334 (Piezo non-specific cation channel, R-Ras-binding domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00267249
Corresponding_transcriptSRAE_X000167500.1
Corresponding_proteinSRP09484
Matching_cDNAFC814592Inferred_automaticallytranscript_builder.pl
CD526074Inferred_automaticallytranscript_builder.pl
FC820667Inferred_automaticallytranscript_builder.pl
Brief_identificationPiezo family-containing protein
RNASeq_FPKMWBls:000067740.1763From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
40.6341From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
41.855From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
41.895From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
43.1505From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
43.4753From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:000067817.9609From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
19.8747From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
43.3272From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
43.6585From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
44.2908From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
44.3215From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
45.7691From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
45.9028From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:000068033.0697From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.983008From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated