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WormBase Tree Display for CDS: SRAE_X000166000

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Name Class

SRAE_X000166000SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons112
65210
250740
7951789
18351996
DB_infoDatabaseUniProtUniProtAccA0A090KXD2
UniProtIdA0A090KXD2_STRRB
DB_remarkcontains similarity to Pfam domains PF00595 (PDZ domain), PF00610 (Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)), PF00778 (DIX domain); contains similarity to Interpro domains IPR038207 (DIX domain superfamily), IPR029071 (Ubiquitin-like domain superfamily), IPR001158 (DIX domain), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR015506 (Dishevelled-related protein), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR000591 (DEP domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267234
Corresponding_transcriptSRAE_X000166000.1
Corresponding_proteinSRP09888
Brief_identificationSegment polarity protein dishevelled
RNASeq_FPKMWBls:000067731.336From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
31.588From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
31.9839From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
32.1976From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
33.5129From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
33.8391From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067816.2658From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
21.6691From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
27.8286From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
29.5278From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
29.6575From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
29.8828From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
30.8184From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
32.0407From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
WBls:00006803.27088From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006822.20268From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated