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WormBase Tree Display for CDS: SRAE_X000165700

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Name Class

SRAE_X000165700SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons164
127218
267509
5585312
DB_infoDatabaseUniProtUniProtAccA0A090KRB0
UniProtIdA0A090KRB0_STRRB
DB_remarkcontains similarity to Pfam domains PF02141 (DENN (AEX-3) domain), PF02893 (GRAM domain), PF03456 (uDENN domain), PF06602 (Myotubularin-like phosphatase domain), PF12335 (Myotubularin protein); contains similarity to Interpro domains IPR005112 (dDENN domain), IPR005113 (uDENN domain), IPR004182 (GRAM domain), IPR010569 (Myotubularin-like, phosphatase domain), IPR029021 (Protein-tyrosine phosphatase-like), IPR022096 (SBF1/SBF2 domain), IPR030564 (Myotubularin family), IPR001194 (cDENN domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267231
Corresponding_transcriptSRAE_X000165700.1
Corresponding_proteinSRP08529
Brief_identificationMyotubularin-related protein 5
RNASeq_FPKMWBls:000067712.4895From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
12.5413From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
12.6793From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
12.8407From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
13.817From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
14.1957From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:000067813.5481From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
13.6604From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
13.7878From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
13.8005From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
13.8785From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
14.6818From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
5.17281From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
5.94275From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:00006803.2701From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.978717From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated