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WormBase Tree Display for CDS: SRAE_X000165600

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Name Class

SRAE_X000165600SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1116
1662038
DB_infoDatabaseUniProtUniProtAccA0A090KQV0
UniProtIdA0A090KQV0_STRRB
DB_remarkcontains similarity to Pfam domains PF00005 (ABC transporter), PF06472 (ABC transporter transmembrane region 2); contains similarity to Interpro domains IPR011527 (ABC transporter type 1, transmembrane domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR031241 (), IPR003439 (ABC transporter-like, ATP-binding domain), IPR036640 (ABC transporter type 1, transmembrane domain superfamily), IPR003593 (AAA+ ATPase domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267230
Corresponding_transcriptSRAE_X000165600.1
Corresponding_proteinSRP01293
Brief_identificationLD11581p
RNASeq_FPKMWBls:000067741.3767From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
41.6678From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
47.1671From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
47.2124From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
47.3222From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
47.5083From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067810.2846From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
12.558From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
12.9178From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
3.81313From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
6.34234From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
8.25415From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
9.50204From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
9.80685From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:00006800.222584From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068211.8824From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated