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WormBase Tree Display for CDS: SRAE_X000165300

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Name Class

SRAE_X000165300SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons175
123280
326875
9231141
DB_infoDatabaseUniProtUniProtAccA0A090KVL2
UniProtIdA0A090KVL2_STRRB
DB_remarkcontains similarity to Pfam domains PF00339 (Arrestin (or S-antigen), N-terminal domain), PF02752 (Arrestin (or S-antigen), C-terminal domain); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR011022 (Arrestin C-terminal-like domain), IPR014752 (Arrestin-like, C-terminal), IPR011021 (Arrestin-like, N-terminal)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267227
Corresponding_transcriptSRAE_X000165300.1
Corresponding_proteinSRP06668
Brief_identificationArrestin-like, N-terminal domain and Immunoglobulin E-set domain-containing protein
RNASeq_FPKMWBls:00006772.00086From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
2.49288From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
2.66255From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
3.03843From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
3.60893From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
4.0528From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:00006780.565475From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
1.11562From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
1.13929From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
1.18323From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
1.22732From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
1.32395From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
1.59923From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
1.89947From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:000068046.5329From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated