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WormBase Tree Display for CDS: SRAE_X000159500

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Name Class

SRAE_X000159500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons124
73585
635901
9551125
DB_infoDatabaseUniProtUniProtAccA0A090MP36
UniProtIdA0A090MP36_STRRB
DB_remarkcontains similarity to Pfam domain PF03096 (Ndr family); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR004142 (NDRG)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00267168
Corresponding_transcriptSRAE_X000159500.1
Corresponding_proteinSRP03709
Matching_cDNAFC817168Inferred_automaticallytranscript_builder.pl
BI323694Inferred_automaticallytranscript_builder.pl
FC811605Inferred_automaticallytranscript_builder.pl
Brief_identificationBcDNA.GH02439
RNASeq_FPKMWBls:0000677235.983From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
239.606From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
246.734From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
248.967From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
273.224From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
280.343From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:0000678188.055From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
198.303From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
199.983From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
202.11From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
236.577From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
240.449From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
71.0877From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
76.5392From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:00006801362.53From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068272.9493From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated