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WormBase Tree Display for CDS: SRAE_X000157500

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Name Class

SRAE_X000157500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons146
38384021
65809532
DB_infoDatabaseUniProtUniProtAccA0A090MP18
UniProtIdA0A090MP18_STRRB
DB_remarkcontains similarity to Pfam domains PF02140 (Galactose binding lectin domain), PF02793 (Hormone receptor domain); contains similarity to Interpro domains IPR001879 (GPCR, family 2, extracellular hormone receptor domain), IPR036445 (GPCR family 2, extracellular hormone receptor domain superfamily), IPR000922 (D-galactoside/L-rhamnose binding SUEL lectin domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267148
Corresponding_transcriptSRAE_X000157500.1
Corresponding_proteinSRP11901
Brief_identificationGPS motif domain and D-galactoside/L-rhamnose binding SUEL lectin domain and GPCR, family 2,extracellular hormone receptor domain and GPCR, family 2-like domain-containing protein
RNASeq_FPKMWBls:000067710.7297From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
10.8055From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
11.3646From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
11.3997From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
11.5104From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
12.1768From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:000067811.0964From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
11.6649From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
11.8707From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
12.028From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
3.26278From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
8.41671From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
8.57712From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
9.38194From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:00006804.69911From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated