Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: SRAE_X000156800

expand all nodes | collapse all nodes | view schema

Name Class

SRAE_X000156800SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons119
691240
DB_infoDatabaseUniProtUniProtAccA0A090KR18
UniProtIdA0A090KR18_STRRB
DB_remarkcontains similarity to Pfam domains PF00108 (Thiolase, N-terminal domain), PF02803 (Thiolase, C-terminal domain); contains similarity to Interpro domains IPR002155 (Thiolase), IPR020616 (Thiolase, N-terminal), IPR020617 (Thiolase, C-terminal), IPR016039 (Thiolase-like)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00267141
Corresponding_transcriptSRAE_X000156800.1
Corresponding_proteinSRP10105
Matching_cDNACD421584Inferred_automaticallytranscript_builder.pl
FC814138Inferred_automaticallytranscript_builder.pl
CD524805Inferred_automaticallytranscript_builder.pl
FC820165Inferred_automaticallytranscript_builder.pl
FC819415Inferred_automaticallytranscript_builder.pl
Brief_identification3-ketoacyl-CoA thiolase, mitochondrial
RNASeq_FPKMWBls:0000677239.339From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
244.112From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
266.052From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
267.128From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
271.421From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
275.384From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
WBls:0000678125.978From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
128.469From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
144.394From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
147.235From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
150.342From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
154.576From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
78.1536From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
83.1313From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:0000680335.848From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682444.98From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated