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WormBase Tree Display for CDS: SRAE_X000150900

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Name Class

SRAE_X000150900SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1388
4311428
18661877
DB_infoDatabaseUniProtUniProtAccA0A090KQX3
UniProtIdA0A090KQX3_STRRB
DB_remarkcontains similarity to Pfam domain PF01412 (Putative GTPase activating protein for Arf); contains similarity to Interpro domains IPR037278 (ARFGAP/RecO-like zinc finger), IPR001164 (Arf GTPase activating protein), IPR038508 (ArfGAP domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00267081
Corresponding_transcriptSRAE_X000150900.1
Corresponding_proteinSRP01161
Matching_cDNAFC810800Inferred_automaticallytranscript_builder.pl
FC821918Inferred_automaticallytranscript_builder.pl
FC821328Inferred_automaticallytranscript_builder.pl
FC821304Inferred_automaticallytranscript_builder.pl
FC821944Inferred_automaticallytranscript_builder.pl
CB275174Inferred_automaticallytranscript_builder.pl
CB275130Inferred_automaticallytranscript_builder.pl
Brief_identificationADP-ribosylation factor GTPase activating protein 3
RNASeq_FPKMWBls:0000677109.399From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
112.391From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
112.89From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
114.555From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
115.904From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
116.592From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:0000678100.585From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
100.936From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
103.039From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
105.149From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
110.871From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
114.365From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
71.4002From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
84.2409From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068062.4042From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006825.61097From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated