Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: SRAE_X000149600

expand all nodes | collapse all nodes | view schema

Name Class

SRAE_X000149600SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons128
20982160
22102290
23362607
26574777
49465092
54757337
DB_infoDatabaseUniProtUniProtAccA0A090MNW2
UniProtIdA0A090MNW2_STRRB
DB_remarkcontains similarity to Pfam domains PF00122 (E1-E2 ATPase), PF13246 (Cation transport ATPase (P-type)), PF16209 (Phospholipid-translocating ATPase N-terminal), PF16212 (Phospholipid-translocating P-type ATPase C-terminal); contains similarity to Interpro domains IPR023298 (P-type ATPase, transmembrane domain superfamily), IPR036412 (HAD-like superfamily), IPR008250 (P-type ATPase, A domain superfamily), IPR032630 (P-type ATPase, C-terminal), IPR001757 (P-type ATPase), IPR030348 (), IPR023299 (P-type ATPase, cytoplasmic domain N), IPR032631 (P-type ATPase, N-terminal), IPR006539 (P-type ATPase, subfamily IV)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267068
Corresponding_transcriptSRAE_X000149600.1
Corresponding_proteinSRP02119
Brief_identificationProbable phospholipid-transporting ATPase IM
RNASeq_FPKMWBls:000067711.3073From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
11.6429From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
6.49572From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
6.54212From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
9.21662From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
9.45909From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006781.78419From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
1.86125From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
2.50663From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
2.59165From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
2.6404From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
2.81756From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
3.3504From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
3.4488From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:00006803.3007From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated