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WormBase Tree Display for CDS: SRAE_X000146500

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Name Class

SRAE_X000146500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1111
1502456
DB_infoDatabaseUniProtUniProtAccA0A090KQU0
UniProtIdA0A090KQU0_STRRB
DB_remarkcontains similarity to Pfam domain PF00135 (Carboxylesterase family); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR000997 (Cholinesterase), IPR002018 (Carboxylesterase, type B)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00267036
Corresponding_transcriptSRAE_X000146500.1
Corresponding_proteinSRP04791
Matching_cDNAFC818981Inferred_automaticallytranscript_builder.pl
CB097438Inferred_automaticallytranscript_builder.pl
FC818863Inferred_automaticallytranscript_builder.pl
CB097892Inferred_automaticallytranscript_builder.pl
Brief_identificationAcetylcholinesterase
RNASeq_FPKMWBls:00006770.098693From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
0.155537From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
0.178615From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
0.178856From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
0.179209From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
0.222968From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:000067811.5691From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
12.9953From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
24.0758From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
24.8252From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
30.2366From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
30.3691From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
30.8522From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
31.9103From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:00006800.262811From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated