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WormBase Tree Display for CDS: SRAE_X000145400

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Name Class

SRAE_X000145400SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons113
221832
881960
DB_infoDatabaseUniProtUniProtAccA0A090KQC8
UniProtIdA0A090KQC8_STRRB
DB_remarkcontains similarity to Pfam domains PF00578 (AhpC/TSA family), PF10417 (C-terminal domain of 1-Cys peroxiredoxin); contains similarity to Interpro domains IPR024706 (Peroxiredoxin, AhpC-type), IPR019479 (Peroxiredoxin, C-terminal), IPR000866 (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant), IPR036249 (Thioredoxin-like superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00267025
Corresponding_transcriptSRAE_X000145400.1
Corresponding_proteinSRP01812
Brief_identificationAlkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain and Thioredoxin-like fold domain and Peroxiredoxin, C-terminal domain and Peroxiredoxin, AhpC-type family-containing protein
RNASeq_FPKMWBls:0000677315.451From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
322.163From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
343.646From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
344.897From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
348.479From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
350.962From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:0000678135.609From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
214.513From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
527.16From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
538.515From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
543.031From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
546.371From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
576.042From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
580.208From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:0000680504.853From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682365.256From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated