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WormBase Tree Display for CDS: SRAE_X000144300

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Name Class

SRAE_X000144300SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons11437
DB_infoDatabaseUniProtUniProtAccA0A090KWW5
UniProtIdA0A090KWW5_STRRB
DB_remarkcontains similarity to Pfam domain PF01593 (Flavin containing amine oxidoreductase); contains similarity to Interpro domains IPR036188 (FAD/NAD(P)-binding domain superfamily), IPR002937 (Amine oxidase)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00267014
Corresponding_transcriptSRAE_X000144300.1
SRAE_X000144300.2
Corresponding_proteinSRP03032
Matching_cDNABG894269Inferred_automaticallytranscript_builder.pl
FC815023Inferred_automaticallytranscript_builder.pl
FC814730Inferred_automaticallytranscript_builder.pl
BI397280Inferred_automaticallytranscript_builder.pl
FC809831Inferred_automaticallytranscript_builder.pl
BG893462Inferred_automaticallytranscript_builder.pl
BG894044Inferred_automaticallytranscript_builder.pl
FC815356Inferred_automaticallytranscript_builder.pl
FC809990Inferred_automaticallytranscript_builder.pl
FC815182Inferred_automaticallytranscript_builder.pl
Brief_identificationAmine oxidase domain-containing protein
RNASeq_FPKMWBls:00006774.91735From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
5.10994From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
8.53987From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
9.17246From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
9.25416From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
9.45895From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:00006780.024957From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
0.042182From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
0.04233From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
0.056071From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
0.083801From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
0.083855From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
0.175205From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
0From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:00006800.304512From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006828.9416From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated