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WormBase Tree Display for CDS: SRAE_X000139500

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Name Class

SRAE_X000139500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1126
175271
322400
446539
5771761
DB_infoDatabaseUniProtUniProtAccA0A090KQJ3
UniProtIdA0A090KQJ3_STRRB
DB_remarkcontains similarity to Pfam domains PF00370 (FGGY family of carbohydrate kinases, N-terminal domain), PF02782 (FGGY family of carbohydrate kinases, C-terminal domain); contains similarity to Interpro domains IPR018484 (Carbohydrate kinase FGGY, N-terminal), IPR018485 (Carbohydrate kinase FGGY, C-terminal), IPR000577 (Carbohydrate kinase, FGGY)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00266963
Corresponding_transcriptSRAE_X000139500.1
Corresponding_proteinSRP02470
Matching_cDNABI502412Inferred_automaticallytranscript_builder.pl
BG893519Inferred_automaticallytranscript_builder.pl
FC817366Inferred_automaticallytranscript_builder.pl
FC810425Inferred_automaticallytranscript_builder.pl
BI323472Inferred_automaticallytranscript_builder.pl
FC815831Inferred_automaticallytranscript_builder.pl
FC809537Inferred_automaticallytranscript_builder.pl
Brief_identificationPutative glycerol kinase 5
RNASeq_FPKMWBls:000067710.0775From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
10.2554From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
11.076From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
11.2752From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
11.64From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
11.7651From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067811.525From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
17.7723From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
20.7911From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
20.8691From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
21.7984From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
22.5472From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
23.1617From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
8.63826From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:00006805.52929From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823.18386From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated