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WormBase Tree Display for CDS: SRAE_X000139400

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Name Class

SRAE_X000139400SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1185
442619
DB_infoDatabaseUniProtUniProtAccA0A090KQ45
UniProtIdA0A090KQ45_STRRB
DB_remarkcontains similarity to Pfam domain PF00887 (Acyl CoA binding protein); contains similarity to Interpro domains IPR035984 (Acyl-CoA binding protein superfamily), IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR000582 (Acyl-CoA-binding protein, ACBP)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusConfirmed
VisibleGeneWBGene00266962
Corresponding_transcriptSRAE_X000139400.1
Corresponding_proteinSRP07679
Matching_cDNABI324319Inferred_automaticallytranscript_builder.pl
FC810629Inferred_automaticallytranscript_builder.pl
Brief_identificationAcyl-CoA-binding protein, ACBP domain and FERM/acyl-CoA-binding protein, 3-helical bundle domain-containing protein
RNASeq_FPKMWBls:000067716.849From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
16.9014From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
24.2846From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
26.4051From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
27.7087From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
32.1241From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:000067813.4291From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
33.093From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
35.5262From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
36.6369From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
43.0396From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
46.8401From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
56.3199From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
61.6214From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:000068038.0762From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682291.84From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated