Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: SRAE_X000137500

expand all nodes | collapse all nodes | view schema

Name Class

SRAE_X000137500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1210
2613089
DB_infoDatabaseUniProtUniProtAccA0A090KQG7
UniProtIdA0A090KQG7_STRRB
DB_remarkcontains similarity to Pfam domains PF00109 (Beta-ketoacyl synthase, N-terminal domain), PF02801 (Beta-ketoacyl synthase, C-terminal domain), PF16197 (Ketoacyl-synthetase C-terminal extension); contains similarity to Interpro domains IPR020841 (Polyketide synthase, beta-ketoacyl synthase domain), IPR032821 (Polyketide synthase, C-terminal extension), IPR014031 (Beta-ketoacyl synthase, C-terminal), IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR014030 (Beta-ketoacyl synthase, N-terminal), IPR016039 (Thiolase-like), IPR001227 (Acyl transferase domain superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266943
Corresponding_transcriptSRAE_X000137500.1
Corresponding_proteinSRP08507
RNASeq_FPKMWBls:00006774.4227From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
4.84976From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
5.11614From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
5.22276From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
5.33552From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
5.49026From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:000067815.257From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
15.3465From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
15.8908From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
16.1177From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
17.6288From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
17.8507From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
5.43184From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
7.83861From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:00006800.334849From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.397919From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated