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WormBase Tree Display for CDS: SRAE_X000137200

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Name Class

SRAE_X000137200SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1250
2977114
DB_infoDatabaseUniProtUniProtAccA0A090MNI2
UniProtIdA0A090MNI2_STRRB
DB_remarkcontains similarity to Pfam domains PF01431 (Peptidase family M13), PF05649 (Peptidase family M13); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR042089 (Peptidase M13, domain 2), IPR018497 (Peptidase M13, C-terminal domain), IPR000718 (Peptidase M13), IPR008753 (Peptidase M13, N-terminal domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00266940
Corresponding_transcriptSRAE_X000137200.1
Corresponding_proteinSRP02363
Matching_cDNABG893770Inferred_automaticallytranscript_builder.pl
FC809467Inferred_automaticallytranscript_builder.pl
BG893556Inferred_automaticallytranscript_builder.pl
FC814756Inferred_automaticallytranscript_builder.pl
BG893992Inferred_automaticallytranscript_builder.pl
FC815391Inferred_automaticallytranscript_builder.pl
FC814925Inferred_automaticallytranscript_builder.pl
Brief_identificationPhosphate-regulating neutral endopeptidase
RNASeq_FPKMWBls:000067713.1006From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
13.2383From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
14.5704From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
15.4926From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
22.4347From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
22.8889From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:00006782.12802From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
2.85469From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
4.23884From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
4.41832From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
6.28353From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
6.39368From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
6.911From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
7.09994From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
WBls:00006801.55798From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006822.85058From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated