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WormBase Tree Display for CDS: SRAE_X000134300

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Name Class

SRAE_X000134300SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1138
1891641
16912352
DB_infoDatabaseUniProtUniProtAccA0A090KWF8
UniProtIdA0A090KWF8_STRRB
DB_remarkcontains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00266911
Corresponding_transcriptSRAE_X000134300.1
Corresponding_proteinSRP01465
Matching_cDNAFC818669Inferred_automaticallytranscript_builder.pl
FC818107Inferred_automaticallytranscript_builder.pl
BM879296Inferred_automaticallytranscript_builder.pl
BM879864Inferred_automaticallytranscript_builder.pl
BI450565Inferred_automaticallytranscript_builder.pl
FC812958Inferred_automaticallytranscript_builder.pl
Brief_identificationArmadillo-like helical domain and Armadillo-type fold domain-containing protein
RNASeq_FPKMWBls:000067732.2831From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
32.6662From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
32.8105From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
33.6687From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
38.2964From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
38.6827From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:000067816.6358From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
17.2991From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
45.9778From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
46.6111From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
47.1859From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
48.3436From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
49.0171From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
49.5785From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:000068021.8038From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006824.94324From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated