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WormBase Tree Display for CDS: SRAE_X000132800

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Name Class

SRAE_X000132800SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons159
128609
7492815
28663299
33503448
DB_infoDatabaseUniProtUniProtAccA0A090MND0
UniProtIdA0A090MND0_STRRB
DB_remarkcontains similarity to Pfam domains PF00102 (Protein-tyrosine phosphatase), PF10409 (C2 domain of PTEN tumour-suppressor protein); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR029021 (Protein-tyrosine phosphatase-like), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain), IPR014020 (Tensin phosphatase, C2 domain)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00266895
Corresponding_transcriptSRAE_X000132800.1
Corresponding_proteinSRP04669
Matching_cDNAFC815358Inferred_automaticallytranscript_builder.pl
BI703943Inferred_automaticallytranscript_builder.pl
Brief_identificationPhosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
RNASeq_FPKMWBls:00006771.55507From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
1.59809From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
1.64086From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
1.691From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
1.83017From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
1.99781From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006782.1282From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
2.76782From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
2.77435From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
2.87557From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
2.97543From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
3.3449From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
3.81006From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
4.01738From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:00006802.67209From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.602078From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated