Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: SRAE_X000131900

expand all nodes | collapse all nodes | view schema

Name Class

SRAE_X000131900SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons119
84539177
92429409
94669576
DB_infoDatabaseUniProtUniProtAccA0A090KWC8
UniProtIdA0A090KWC8_STRRB
DB_remarkcontains similarity to Pfam domains PF13696 (Zinc knuckle), PF17180 (Zinc-binding domain); contains similarity to Interpro domains IPR033446 (Zinc finger domain-containing protein 24, zinc-binding domain), IPR025829 (Zinc knuckle CX2CX3GHX4C), IPR001878 (Zinc finger, CCHC-type), IPR027377 (ZAR1/RTP1-5-like, 3CxxC-type zinc finger), IPR036875 (Zinc finger, CCHC-type superfamily)
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPredicted
VisibleGeneWBGene00266886
Corresponding_transcriptSRAE_X000131900.1
Corresponding_proteinSRP04290
Brief_identificationZinc finger, CCHC-type domain and Zinc knuckle CX2CX3GHX4C domain and Zinc-binding domain-containing protein
RNASeq_FPKMWBls:000067721.6942From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
22.3876From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
24.6608From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
25.4272From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
29.1871From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
33.2359From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067817.7689From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
17.7951From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
20.0142From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
21.1393From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
21.6274From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
25.4487From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
25.459From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
29.1896From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068096.4609From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.47418From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated