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WormBase Tree Display for CDS: SRAE_X000131500

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Name Class

SRAE_X000131500SMapS_parentSequenceSRAE_chrX_scaffold2
StructureSource_exons1256
3661618
DB_infoDatabaseUniProtUniProtAccA0A090KPS8
UniProtIdA0A090KPS8_STRRB
DB_remarkcontains similarity to Pfam domains PF00246 (Zinc carboxypeptidase), PF13620 (Carboxypeptidase regulatory-like domain); contains similarity to Interpro domains IPR000834 (Peptidase M14, carboxypeptidase A), IPR008969 (Carboxypeptidase-like, regulatory domain superfamily), IPR015567 ()
OriginFrom_laboratoryMBM
SpeciesStrongyloides ratti
PropertiesCodingCDS
CDS_predicted_bywormbase
Prediction_statusPartially_confirmed
VisibleGeneWBGene00266882
Corresponding_transcriptSRAE_X000131500.1
Corresponding_proteinSRP05643
Matching_cDNABI324124Inferred_automaticallytranscript_builder.pl
FC816071Inferred_automaticallytranscript_builder.pl
Brief_identificationPeptidase M14, carboxypeptidase A domain and Carboxypeptidase-like, regulatory domain and Carboxypeptidase, regulatory domain-containing protein
RNASeq_FPKMWBls:0000677105.841From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
106.629From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
111.511From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
114.859From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
118.465From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
121.337From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067837.3319From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
52.0938From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
81.7563From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
82.6824From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
84.4392From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
84.6631From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
88.3167From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
89.3349From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
WBls:00006801230.44From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006822.08431From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Methodcurated